MARA results: cerebellum, embryo E16, biol

Sample name: cerebellum, embryo E16, biol_rep3 (E16R3)

Sorted Z-values histogram for the sample cerebellum, embryo E16, biol_rep3 (E16R3)

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.391	Rfx1 Rfxap Rfx5 Rfxank Rfx4 Rfx3 Rfx2
REST.p3	6.008	Rest
UGUGCUU	5.281
ESRRA.p2	4.144	Esrra
ZFP161.p2	3.275	Zfp161
SNAI1..3.p2	3.222	Snai2 Snai1 Snai3
NRF1.p2	2.930	Nrf1
ZEB1.p2	2.799	Zeb1
ZNF143.p2	2.792	Zfp143
GGCAGUG	2.766
EWSR1-FLI1.p2	2.754	Fli1 Ewsr1
HOX{A6,A7,B6,B7}.p2	2.629	Hoxb6 Hoxa7 Hoxb7 Hoxa6
MYFfamily.p2	2.423	Myod1 Myf6 Myf5 Myog
KLF12.p2	2.416	Klf12
NFIX.p2	2.402	Nfix
MAFB.p2	2.156	Mafb
EGR1..3.p2	2.133	Egr3 Egr1 Egr2
UUGGCAC	1.922
EVI1.p2	1.904	Mecom
ACAUUCA	1.874
ZBTB6.p2	1.838	Zbtb6
ATF6.p2	1.828	Atf6
DBP.p2	1.824	Dbp
AHR_ARNT_ARNT2.p2	1.761	Arnt Ahr Arnt2
CAGCAGG	1.681
SP1.p2	1.631	Sp1
TBX4,5.p2	1.501	Tbx5 Tbx4
ZNF423.p2	1.488	Zfp423
ZBTB16.p2	1.484	Zbtb16
FOXN1.p2	1.418	Foxn1
NKX2-2,8.p2	1.363	Nkx2-2 Nkx2-9
TGIF1.p2	1.353	Tgif1
POU5F1.p2	1.279	Pou5f1
UAAGACG	1.223
GCAGCAU	1.220
FOX{I1,J2}.p2	1.182	Foxi1 Foxj2
ATF5_CREB3.p2	1.145	Atf5 Creb3
SOX17.p2	1.135	Sox17
GUGCAAA	1.121
GUAAACA	1.089
HMX1.p2	1.049	Hmx1
ZNF148.p2	0.989	Zfp148
ATF2.p2	0.985	Atf2
ACCCUGU	0.983
SMAD1..7,9.p2	0.974	Smad5 Smad1 Smad3 Smad4 Smad2 Smad6 Smad7 Smad9
FOX{F1,F2,J1}.p2	0.949	Foxf2 Foxj1 Foxf1a
SRY.p2	0.938	Sry
NFE2L2.p2	0.930	Nfe2l2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	0.922	Arnt Max Myc Usf1 Bhlhe40 Arnt2
UGAAAUG	0.915
UCCCUUU	0.876
PAX2.p2	0.865	Pax2
UAAGACU	0.849
SPZ1.p2	0.812	Spz1
MZF1.p2	0.784	Mzf1
T.p2	0.782	T
GTF2I.p2	0.765	Gtf2i
NKX2-1,4.p2	0.728	Nkx2-1 Nkx2-4
LMO2.p2	0.704	Lmo2
TAL1_TCF{3,4,12}.p2	0.701	Tcf3 Tcf4 Tal1 Tcf12	$logo of TAL1_TCF{3,4,12}.p2$
UAUUGCU	0.691
RREB1.p2	0.680	Rreb1
NKX3-1.p2	0.668	Nkx3-1
TFCP2.p2	0.648	Tcfcp2
CUCCCAA	0.645
MTF1.p2	0.639	Mtf1
UGCAUUG	0.635
HLF.p2	0.629	Hlf
HOX{A5,B5}.p2	0.628	Hoxb5 Hoxa5
DMAP1_NCOR{1,2}_SMARC.p2	0.602	Smarca1 Smarcc2 Smarca5 Ncor1 Ncor2 Dmap1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GAGAACU	0.601
UUGGUCC	0.595
AUUGCAC	0.593
ZIC1..3.p2	0.561	Zic1 Zic2 Zic3
GLI1..3.p2	0.543	Gli1 Gli2 Gli3
AUGGCAC	0.533
CRX.p2	0.530	Crx
POU6F1.p2	0.519	Pou6f1
UUGGCAA	0.480
AUGACAC	0.462
ACAGUAC	0.446
MSX1,2.p2	0.429	Msx1 Msx2
GZF1.p2	0.423	Gzf1
GCUACAU	0.415
NKX3-2.p2	0.413	Nkx3-2
PRRX1,2.p2	0.394	Prrx2 Prrx1
CTCF.p2	0.390	Ctcf
AACAGUC	0.390
NHLH1,2.p2	0.382	Nhlh1 Nhlh2
GGCUCAG	0.378
RORA.p2	0.357	Rora
ETS1,2.p2	0.346	Ets2 Ets1
GCUGGUG	0.344
AGCAGCG	0.336
GATA1..3.p2	0.326	Gata1 Gata2 Gata3
POU1F1.p2	0.317	Pou1f1
CGUGUCU	0.308
CUACAGU	0.285
GAUUGUC	0.281
BACH2.p2	0.278	Bach2
POU5F1_SOX2{dimer}.p2	0.271	Pou5f1 Sox2	$logo of POU5F1_SOX2{dimer}.p2$
GGAAGAC	0.266
KLF4.p3	0.258	Klf4
EHF.p2	0.245	Ehf
PBX1.p2	0.243	Pbx1
UCAAGUA	0.240
RXRG_dimer.p3	0.238	Nr1h2 Rxra Pparg Ppara Rxrb Rxrg
SOX2.p2	0.233	Sox2
GFI1B.p2	0.231	Gfi1b
ZNF384.p2	0.219	Zfp384
AACACUG	0.209
PAX5.p2	0.207	Pax5
AAUACUG	0.205
GAUCAGA	0.189
HOX{A4,D4}.p2	0.164	Hoxa4 Hoxd4
NFE2.p2	0.152	Nfe2
HIC1.p2	0.152	Hic1
CAGUGCA	0.152
GAUAUGU	0.145
AAGGUGC	0.140
STAT1,3.p3	0.130	Stat1 Stat3
ATF4.p2	0.120	Atf4
UCACAGU	0.107
NKX6-1,2.p2	0.097	Nkx6-1 Nkx6-2
FOXD3.p2	0.097	Foxd3
FOXO1,3,4.p2	0.081	Foxo1 Foxo4 Foxo3
AACGGAA	0.079
CGUACCG	0.066
EOMES.p2	0.065	Eomes
PAX8.p2	0.062	Pax8
AGCACCA	0.058
SREBF1,2.p2	0.042	Srebf1 Srebf2
EBF1.p2	0.041	Ebf1
AAAGUGC	0.040
ACUGCAU	0.025
ELK1,4_GABP{A,B1}.p3	0.024	Gabpa Gabpb1 Elk4 Elk1	$logo of ELK1,4_GABP{A,B1}.p3$
TBP.p2	0.011	Tbp
AR.p2	0.005	Ar
GGAGUGU	-0.005
UUGUUCG	-0.008
PAX3,7.p2	-0.014	Pax7 Pax3
AGCAGCA	-0.025
UGACCUA	-0.026
AAUCUCU	-0.028
GGAAUGU	-0.029
ACCCGUA	-0.034
PAX4.p2	-0.044	Pax4
AACCGUU	-0.058
HOXA9_MEIS1.p2	-0.061	Meis1 Hoxa9
CCAGCAU	-0.061
AAUGCCC	-0.065
RBPJ.p2	-0.069	Rbpj
GGACGGA	-0.084
TP53.p2	-0.085	Trp53
PAX6.p2	-0.089	Pax6
NANOG{mouse}.p2	-0.101	Nanog
GAGAUGA	-0.101
ACUGGCC	-0.116
AAUCUCA	-0.119
BPTF.p2	-0.121	Bptf
CEBPA,B_DDIT3.p2	-0.130	Ddit3 Cebpa Cebpb
POU3F1..4.p2	-0.132	Pou3f1 Pou3f3 Pou3f2 Pou3f4
CUX2.p2	-0.153	Cux2
AGGUAGU	-0.157
AGUGCAA	-0.165
PDX1.p2	-0.169	Pdx1
RUNX1..3.p2	-0.189	Runx1 Runx3 Runx2
AACCUGG	-0.211
GGCAAGA	-0.223
SOX5.p2	-0.226	Sox5
RXRA_VDR{dimer}.p2	-0.246	Vdr	$logo of RXRA_VDR{dimer}.p2$
GUCAGUU	-0.253
RXR{A,B,G}.p2	-0.275	Rxra Rxrb Rxrg
UUUUUGC	-0.316
AIRE.p2	-0.328	Aire
FOXQ1.p2	-0.328	Foxq1
JUN.p2	-0.334	Jun Jund Junb
NR6A1.p2	-0.336	Nr6a1
ESR1.p2	-0.349	Esr1
UGUGCGU	-0.353
AGCUGCC	-0.354
UAAUGCU	-0.356
FEV.p2	-0.373	Fev
ALX1.p2	-0.401	Alx1
ARID5B.p2	-0.404	Arid5b
GUAACAG	-0.406
STAT5{A,B}.p2	-0.415	Stat5b Stat5a
TFAP4.p2	-0.433	Tcfap4
AUGGCUU	-0.445
PATZ1.p2	-0.447	Patz1
HMGA1,2.p2	-0.472	Hmga1 Hmga2
NANOG.p2	-0.481	Nanog
VSX1,2.p2	-0.500	Vsx2 Vsx1
NFE2L1.p2	-0.501	Nfe2l1
LHX3,4.p2	-0.532	Lhx3 Lhx4
SPIB.p2	-0.563	Spib
TFEB.p2	-0.571	Tcfeb
MEF2{A,B,C,D}.p2	-0.573	Mef2a Mef2c Mef2d Mef2b
SOX{8,9,10}.p2	-0.588	Sox9 Sox8 Sox10
FOX{C1,C2}.p2	-0.609	Foxc1 Foxc2
MYBL2.p2	-0.625	Mybl2
HAND1,2.p2	-0.639	Hand1 Hand2
NFATC1..3.p2	-0.640	Nfatc3 Nfatc2 Nfatc1
LEF1_TCF7_TCF7L1,2.p2	-0.659	Tcf7 Tcf7l2 Lef1 Tcf7l1
HSF1,2.p2	-0.669	Hsf1 Hsf2
FOSL2.p2	-0.678	Fosl2
AAGUGCU	-0.691
UCACAUU	-0.718
EN1,2.p2	-0.733	En1 En2
CDX1,2,4.p2	-0.734	Cdx1 Cdx2 Cdx4
NKX2-3_NKX2-5.p2	-0.742	Nkx2-5 Nkx2-3
FOXP3.p2	-0.763	Foxp3
PPARG.p2	-0.776	Pparg
CDC5L.p2	-0.792	Cdc5l
CACAGUG	-0.792
MAZ.p2	-0.794	Maz
TCF4_dimer.p2	-0.800	Tcf4
UGCAUAG	-0.811
HES1.p2	-0.819	Hes1
MYOD1.p2	-0.860	Myod1
HBP1_HMGB_SSRP1_UBTF.p2	-0.868	Hmgb2 Hmgb3 Ssrp1 Ubtf Hbp1
POU2F1..3.p2	-0.882	Pou2f2 Pou2f1 Pou2f3
YY1.p2	-0.888	Yy1
GTF2A1,2.p2	-0.900	Gtf2a1 Gtf2a2
XBP1.p3	-0.918	Xbp1
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.957	Fos Junb Fosl1 Jund Fosb	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NFKB1_REL_RELA.p2	-0.960	Rela Rel Nfkb1
CCUUCAU	-0.973
IKZF2.p2	-0.991	Ikzf2
GAGGUAG	-1.004
ZNF238.p2	-1.007	Zfp238
AGCUUAU	-1.018
FOX{D1,D2}.p2	-1.043	Foxd2 Foxd1
FOXL1.p2	-1.056	Foxl1
CCAGUGU	-1.087
ONECUT1,2.p2	-1.094	Onecut2 Onecut1
SRF.p3	-1.153	Srf
HNF1A.p2	-1.185	Hnf1a
ACAGUAU	-1.195
HIF1A.p2	-1.205	Hif1a
AGUGGUU	-1.229
GUAGUGU	-1.258
bHLH_family.p2	-1.275	Arntl Mitf Mxi1 Tcfe3 Clock Olig2 Mxd4 Hey2 Hey1 Heyl Mlxipl Hes6 Mxd3 Arntl2 Id1 Mnt Olig1 Npas2
IKZF1.p2	-1.296	Ikzf1
EP300.p2	-1.354	Ep300
TLX2.p2	-1.378	Tlx2
UCCAGUU	-1.446
PRDM1.p3	-1.447	Prdm1
CREB1.p2	-1.463	Creb1
CUUUGGU	-1.485
TLX1..3_NFIC{dimer}.p2	-1.554	Tlx1 Tlx3	$logo of TLX1..3_NFIC{dimer}.p2$
NR3C1.p2	-1.591	Nr3c1
IRF1,2,7.p3	-1.627	Irf1 Irf2 Irf7
NR5A1,2.p2	-1.659	Nr5a1 Nr5a2
PITX1..3.p2	-1.806	Pitx2 Pitx3 Pitx1
ADNP_IRX_SIX_ZHX.p2	-1.870	Six5 Zhx1 Irx4 Adnp Zhx3 Zhx2 Irx5 Six2
TFAP2B.p2	-1.871	Tcfap2b
ELF1,2,4.p2	-2.144	Elf2 Elf1 Elf4
MYB.p2	-2.152	Myb
STAT2,4,6.p2	-2.301	Stat2 Stat4 Stat6
HNF4A_NR2F1,2.p2	-2.343	Nr2f1 Nr2f2 Hnf4a
GFI1.p2	-2.345	Gfi1
FOXA2.p3	-2.447	Foxa2
NFIL3.p2	-2.515	Nfil3
NR1H4.p2	-2.581	Nr1h4
TFAP2{A,C}.p2	-2.590	Tcfap2c Tcfap2a
GATA6.p2	-2.659	Gata6
SPI1.p2	-2.672	Sfpi1
CCCUGAG	-4.109
AAGGCAC	-4.880
E2F1..5.p2	-4.974	E2f4 E2f5 E2f2 E2f1 E2f3
TFDP1.p2	-5.179	Tfdp1
TEAD1.p2	-5.293	Tead1 Tead2 Tead3 Tead4
NFY{A,B,C}.p2	-5.368	Nfyc Nfyb Nfya

ISMARA

Project

Navigation

Downloads

Sample name: cerebellum, embryo E16, biol_rep3 (E16R3)

Sorted z-values for every WM.